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High Impact Phenotype Identification System will allow physicians to diagnose and treat genetic conditions in real time

DANVILLE, Pa. – A team of Geisinger researchers has been awarded a $5 million grant from the National Institute of Health’s National Human Genome Research Institute to develop a tool that will allow healthcare providers to diagnose a genetic basis for select medical conditions in real time. 

Determining that a medical condition has a genetic basis can have a significant impact on the course of treatment. The proposed High Impact Phenotype Identification System (HIPIS) will shorten the time between onset of symptoms and discovery of a genetic basis for 13 medical conditions, improving patient care and outcomes. 

“Complex diseases frustrate patients and create a burden on healthcare systems through multiple 
hospitalizations and frequent testing,” said Marc Williams, M.D., professor at Geisinger’s Genomic Medicine Institute and principal investigator for the project. “Enabling physicians to access genetic information in real time could prevent much of this burden by eliminating the gap between onset of symptoms and genetic diagnosis.” 

The research team has identified 13 “high-impact” conditions with a high likelihood of having a genetic basis or for which a genetic diagnosis would significantly affect or alter management of the condition. These include pediatric epilepsy, heart disease, Type 2 diabetes, and congenital kidney disease, among others. 

An analysis of Geisinger’s electronic health records showed that the average time from symptom onset for one of these conditions to diagnosis as a genetic condition is 3.5 years, and in some cases can take up to 12 years. This delay in genetic diagnosis can affect the patient’s treatment and overall health outcomes. 

Working alongside experts in each specialty, researchers will develop models that can identify patients with documented clinical signs and symptoms of these high-impact conditions and allow healthcare providers to screen for and diagnose a genetic basis in real time. The team will also analyze clinical workflow to determine the best points at which to present genetic information to providers.

“This project is a compelling example of something we do well at Geisinger – using robust genomic and clinical data to help make better health easy for our patients,” said Adam Buchanan, M.S., M.P.H., associate professor and director of Geisinger’s Genomic Medicine Institute.

Geisinger has an exciting research environment with more than 50 full-time research faculty and more than 30 clinician scientists. Areas of expertise include precision health, genomics, informatics, data science, implementation science, outcomes research, health services research, bioethics and clinical trials.

About Geisinger
Geisinger is committed to making better health easier for the more than 1 million people it serves. Founded more than 100 years ago by Abigail Geisinger, the system now includes 10 hospital campuses, a health plan with more than half a million members, a research institute and the Geisinger College of Health Sciences, which includes schools of medicine, nursing and graduate education. With more than 25,000 employees and 1,700+ employed physicians, Geisinger boosts its hometown economies in Pennsylvania by billions of dollars annually. Learn more at or connect with us on Facebook, Instagram, LinkedIn and Twitter.

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